Hi Green,
Just to be sure I am following you correctly:
1. You are importing sonar logs into RM, and editing the depths in the sonar viewer.
2. You then want to save the resulting tracks back to GPX format?
You need to select the GPX format and the option "Target Humminbird", which will add the GPX depth extensions for HB (otherwise the GPX format does not contain depth).
If you select multiple tracks at once for export, you will get a single GPX file which contains all of the separate tracks.
The .HT format is the Humminbird track format. This format contains position and depth, but no sonar information. The file names are fixed from 000.HT thru 049.HT and you get one file per track. This format is mostly useful for putting tracks back onto an HB unit.